species:   Artha
pid:       MI0005107
parent:    ath-MIR777
paralog:   
locus:     1:26638000-26638107
matures:   ['UACGCAUUGAGUUUCGUUGCUU', 'GCAACAAAAUCAGUGUGUAUU']
srr:       SRR9216049
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216049.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216049.cram 1:26638000-26638107

0 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

   ***********************                                                       ************************   
AGAGAGCAACAAAAUCAGUGUGUAUUUGUUAAGACAAAUGUUUAUAUAAGUCGUCCAUGCGUUGUACAUUUAAUCUUAACUAAUACGCAUUGAGUUUCGUUGCUUUCU
(((((((((((((.((((((((((((.(((((((.((((((....((((..(((....)))))))))))))..))))))).)))))))))))).))).))))))))))
-----------------------------------------------------------------------------------UACGCAUUGAGUUUCGUUGCUU--- l=22 a=1 c
-----GCAACAAAAUCAGUGUGUAUU---------------------------------------------------------------------------------- l=21 a=0 c*
-----------------------------------------------------------------------------------UACGCAUUGAGUUUCGUUGCUU--- l=22 a=1 ma
-----GCAACAAAAUCAGUGUGUAUU---------------------------------------------------------------------------------- l=21 a=0 ma*

-----------------------------------------------------------------------------------UACGCAUUGAGUUUCGUUGCUU--- l=22 a=1 (c,ma)

mb-01011
ax-1011111
ku-01
ss-110111111110
fn-011
